Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate lyase | Rifp1Sym_ax00060 | Not Available | Positive | 1191782 - 1192684 | 33041.2 |
| aminodeoxychorismate lyase, yceg protein | Rifp1Sym_ax00070 | Not Available | Positive | 1192647 - 1193759 | 41569.2 |
| thymidylate kinase | Rifp1Sym_ax00080 | Not Available | Positive | 1193756 - 1194397 | 23827.6 |
| dna polymerase iii subunit delta-' | Rifp1Sym_ax00090 | Not Available | Positive | 1194398 - 1195387 | 36519.1 |
| type iv pilus assembly pilz | Rifp1Sym_ax00100 | Not Available | Positive | 1195411 - 1195761 | 12408.1 |
| putative deoxyribonuclease ycfh | Rifp1Sym_ax00110 | Not Available | Positive | 1195799 - 1196584 | 28975.5 |
| putative long-chain-fatty-acid--coa ligase | Rifp1Sym_ax00120 | Not Available | Negative | 1196590 - 1198449 | 69917.2 |
| fatty acid oxidation complex subunit alpha | Rifp1Sym_ax00130 | Not Available | Negative | 1198456 - 1200486 | 75696.3 |
| 3-ketoacyl-coa thiolase | Rifp1Sym_ax00140 | Not Available | Negative | 1200483 - 1201784 | 46726.3 |
| acyl-coenzyme a dehydrogenase | Rifp1Sym_ax00150 | Not Available | Negative | 1201806 - 1202654 | 30934.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
