Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate dehydrogenase, decarboxylating | Rifp1Sym_aw00350 | Not Available | Positive | 1181432 - 1182799 | 48829.2 |
| trk system potassium uptake protein trkh | Rifp1Sym_aw00360 | Not Available | Positive | 1182864 - 1184309 | 52278.0 |
| mercuric reductase | Rifp1Sym_aw00370 | Not Available | Positive | 1184400 - 1186535 | 78174.3 |
| hypothetical protein | Rifp1Sym_aw00380 | Not Available | Positive | 1186563 - 1186664 | 3519.58 |
| lipid a biosynthesis lauroyl acyltransferase | Rifp1Sym_aw00390 | Not Available | Negative | 1186672 - 1187682 | 39164.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 | Rifp1Sym_ax00010 | Not Available | Positive | 1187906 - 1188310 | 14799.0 |
| malonyl coa-acyl carrier protein transacylase | Rifp1Sym_ax00020 | Not Available | Positive | 1188340 - 1189281 | 32872.2 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | Rifp1Sym_ax00030 | Not Available | Positive | 1189278 - 1190021 | 25634.9 |
| putative acyl carrier protein | Rifp1Sym_ax00040 | Not Available | Positive | 1190211 - 1190444 | 8599.99 |
| 3-oxoacyl-[acyl-carrier-protein] synthase | Rifp1Sym_ax00050 | Not Available | Positive | 1190544 - 1191785 | 43266.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
