Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-pyrroline-5-carboxylate dehydrogenase | Rifp1Sym_aw00250 | Not Available | Positive | 1170582 - 1172990 | 88296.7 |
| protein of unknown function duf88 | Rifp1Sym_aw00260 | Not Available | Negative | 1173002 - 1173847 | 32477.3 |
| hypothetical protein | Rifp1Sym_aw00270 | Not Available | Positive | 1173981 - 1174274 | 11171.7 |
| hypothetical protein | Rifp1Sym_aw00280 | Not Available | Negative | 1174282 - 1174659 | 14176.3 |
| efflux transporter, rnd family, mfp subunit | Rifp1Sym_aw00290 | Not Available | Negative | 1174662 - 1175960 | 47748.3 |
| hypothetical protein | Rifp1Sym_aw00300 | Not Available | Negative | 1175963 - 1178344 | 87303.7 |
| putative abc transporter atp-binding protein | Rifp1Sym_aw00310 | Not Available | Negative | 1178341 - 1179051 | 25488.7 |
| glucose-6-phosphate 1-dehydrogenase | Rifp1Sym_aw00320 | Not Available | Positive | 1179102 - 1180676 | 59826.4 |
| hypothetical protein | Rifp1Sym_aw00330 | Not Available | Positive | 1180658 - 1180885 | 8706.63 |
| 6-phosphogluconolactonase | Rifp1Sym_aw00340 | Not Available | Positive | 1180893 - 1181357 | 16748.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
