Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geranyltranstransferase | Rifp1Sym_aw00150 | Not Available | Negative | 1162663 - 1163565 | 32648.7 |
| exodeoxyribonuclease vii small subunit | Rifp1Sym_aw00160 | Not Available | Negative | 1163555 - 1163785 | 8646.14 |
| dna topoisomerase 4 subunit b | Rifp1Sym_aw00170 | Not Available | Positive | 1163937 - 1165829 | 69495.9 |
| hypothetical protein | Rifp1Sym_aw00180 | Not Available | Positive | 1165855 - 1166445 | 22423.2 |
| cytochrome oxidase biogenesis protein | Rifp1Sym_aw00190 | Not Available | Positive | 1166399 - 1167037 | 23883.6 |
| hypothetical protein | Rifp1Sym_aw00200 | Not Available | Negative | 1167189 - 1167317 | 4597.51 |
| exopolyphosphatase | Rifp1Sym_aw00210 | Not Available | Negative | 1167314 - 1168705 | 51225.0 |
| phosphohistidine phosphatase sixa | Rifp1Sym_aw00220 | Not Available | Negative | 1168776 - 1169375 | 21879.6 |
| adp-ribose pyrophosphatase | Rifp1Sym_aw00230 | Not Available | Positive | 1169399 - 1169989 | 22758.4 |
| hypothetical protein | Rifp1Sym_aw00240 | Not Available | Positive | 1170068 - 1170556 | 17912.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
