Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12 transporter btub | Rifp1Sym_aw00050 | Not Available | Negative | 1152637 - 1154457 | 66394.0 |
| polysaccharide chain length determinant protein, pep-cterm locus subfamily | Rifp1Sym_aw00060 | Not Available | Negative | 1155208 - 1156776 | 59717.6 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | Rifp1Sym_aw00070 | Not Available | Positive | 1157240 - 1158355 | 40549.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | Rifp1Sym_aw00080 | Not Available | Positive | 1158407 - 1158874 | 16509.2 |
| putative n utilization substance protein b | Rifp1Sym_aw00090 | Not Available | Positive | 1158874 - 1159296 | 15876.2 |
| thiamine-monophosphate kinase | Rifp1Sym_aw00100 | Not Available | Positive | 1159274 - 1160362 | 38418.8 |
| phosphatidylglycerophosphatase a | Rifp1Sym_aw00110 | Not Available | Positive | 1160346 - 1160846 | 18298.9 |
| hypothetical protein | Rifp1Sym_aw00120 | Not Available | Positive | 1160843 - 1161028 | 6798.85 |
| putative aspartyl protease | Rifp1Sym_aw00130 | Not Available | Positive | 1161019 - 1161501 | 17464.1 |
| gtp cyclohydrolase | Rifp1Sym_aw00140 | Not Available | Negative | 1161587 - 1162408 | 31069.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
