Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic sensor signal transduction histidine kinase | Rifp1Sym_av00100 | Not Available | Positive | 1117040 - 1119148 | 78640.4 |
| two component, sigma54 specific, transcriptional regulator | Rifp1Sym_av00110 | Not Available | Positive | 1119175 - 1120518 | 49561.7 |
| transmembrane exosortase epsh | Rifp1Sym_av00120 | Not Available | Positive | 1120505 - 1122034 | 56189.6 |
| tpr repeat-containing protein | Rifp1Sym_av00130 | Not Available | Positive | 1122098 - 1124899 | 103362.0 |
| polysaccharide export protein | Rifp1Sym_av00140 | Not Available | Positive | 1125011 - 1125664 | 23400.4 |
| protein-tyrosine kinase | Rifp1Sym_av00150 | Not Available | Positive | 1125794 - 1126774 | 35050.7 |
| hypothetical protein | Rifp1Sym_av00160 | Not Available | Positive | 1126789 - 1128201 | 53282.3 |
| udp-n-acetylglucosamine 2-epimerase | Rifp1Sym_av00170 | Not Available | Negative | 1128296 - 1129435 | 42024.4 |
| putative cellulose biosynthesis protein | Rifp1Sym_av00180 | Not Available | Positive | 1129614 - 1130852 | 46578.8 |
| Trna-val | Not Available | Not Available | Positive | 1130862 - 1130937 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
