Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| incf plasmid conjugative transfer pilus assembly protein trau | Rifp1Sym_au00160 | Not Available | Negative | 1093695 - 1094708 | 37006.1 |
| patatin-like phospholipase a2 | Rifp1Sym_au00170 | Not Available | Negative | 1095366 - 1096367 | 35320.6 |
| type iv secretory pathway protease traf-like protein | Rifp1Sym_au00180 | Not Available | Negative | 1098351 - 1098881 | 20116.4 |
| hypothetical protein | Rifp1Sym_au00190 | Not Available | Negative | 1098878 - 1099207 | 12079.9 |
| incf plasmid conjugative transfer pilus assembly protein trac | Rifp1Sym_au00200 | Not Available | Negative | 1099207 - 1101732 | 93608.4 |
| conjugative transfer protein trav | Rifp1Sym_au00210 | Not Available | Negative | 1101729 - 1102118 | 14102.7 |
| disulfide interchange protein dsbc | Rifp1Sym_au00220 | Not Available | Negative | 1102115 - 1102978 | 31110.4 |
| incf plasmid conjugative transfer pilus assembly protein trab | Rifp1Sym_au00230 | Not Available | Negative | 1103209 - 1104531 | 47113.3 |
| incf plasmid conjugative transfer pilus assembly protein trak | Rifp1Sym_au00240 | Not Available | Negative | 1104532 - 1105242 | 26261.7 |
| plasmid conjugative transfer protein trae | Rifp1Sym_au00250 | Not Available | Negative | 1105193 - 1105840 | 24295.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
