Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite transporter subfamily | Rifp1Sym_ab00010 | Not Available | Negative | 97100 - 98566 | 53164.8 |
| nitrite reductase | Rifp1Sym_ab00020 | Not Available | Positive | 99027 - 101465 | 89275.0 |
| formate dehydrogenase, alpha subunit | Rifp1Sym_ab00030 | Not Available | Positive | 101892 - 103733 | 68331.2 |
| formate dehydrogenase, alpha subunit | Rifp1Sym_ab00040 | Not Available | Positive | 103835 - 104095 | 9907.17 |
| anaerobic dimethyl sulfoxide reductase chain b | Rifp1Sym_ab00050 | Not Available | Positive | 104190 - 106097 | 69562.9 |
| Trna-thr | Not Available | Not Available | Positive | 106170 - 106245 | Not Available |
| 50s ribosomal protein l21 | Rifp1Sym_ab00060 | Not Available | Positive | 106370 - 106684 | 11524.0 |
| 50s ribosomal protein l27 | Rifp1Sym_ab00070 | Not Available | Positive | 106698 - 106955 | 9089.94 |
| glutamate 5-kinase | Rifp1Sym_ab00090 | Not Available | Positive | 108144 - 109271 | 40222.5 |
| 30s ribosomal protein s20 | Rifp1Sym_ab00100 | Not Available | Negative | 109344 - 109604 | 9411.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
