Brachyspira intermedia PWS/A

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Brachyspirales

Family

Brachyspiraceae

Genus

Brachyspira

Description

Brachyspira intermedia PWS/A is a notable bacterium characterized by its possession of two replicons, which are essential for its genomic structure and function. The organism is cataloged under the accession numbers NC_017242.1 and NC_017243.1, indicating its presence in genetic databases that facilitate research and identification. This bacterium is of particular interest in microbiology, especially in the context of animal health, as Brachyspira species are known to be associated with gastrointestinal diseases in various hosts, particularly in swine. The presence of two replicons may suggest a degree of genomic complexity that could contribute to its adaptability and virulence, although specific traits related to pathogenicity are not detailed. From an ecological perspective, the dual-replicon structure may influence the bacterium's behavior in its natural environment, potentially affecting its interactions with host organisms and other microbial communities. Understanding Brachyspira intermedia PWS/A's genomic configuration can provide insights into its ecological roles and adaptations, which are critical for developing strategies to manage infections caused by this bacterium in agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderBrachyspirales
FamilyBrachyspiraceae
GenusBrachyspira
SpeciesBrachyspira intermedia
StrainPWS/A

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brachyspira intermedia PWS/A, complete sequence.

Gene Summary

Adenine Count

1199089 bp

Thymine Count

1206180 bp

Guanine Count

448159 bp

Cytosine Count

451360 bp

Genome Length

3304788 bp

Protein-coding Genes

2868 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lema family proteinBINT_RS01360Not AvailableNegative303954 - 30456223199.0
basic amino acid abc transporter substrate-binding proteinBINT_RS01365Not AvailablePositive304744 - 30548727586.2
amino acid abc transporter permeaseBINT_RS01370Not AvailablePositive305573 - 30628626231.0
amino acid abc transporter atp-binding proteinBINT_RS01375Not AvailablePositive306279 - 30700727413.9
site-2 protease family proteinBINT_RS01380Not AvailablePositive307230 - 30796727725.0
hypothetical proteinBINT_RS01385Not AvailableNegative307977 - 30887034684.6
hypothetical proteinBINT_RS01390Not AvailableNegative308894 - 30995841023.1
duf948 domain-containing proteinBINT_RS01395Not AvailableNegative309984 - 31039115302.2
ytxh domain-containing proteinBINT_RS01400Not AvailableNegative310400 - 31066610036.0
paai family thioesteraseBINT_RS01405Not AvailablePositive310884 - 31139619082.1

Displaying genes 281 – 290 of 2929 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014031Butyric acidC4H8O2Chemical structure of Butyric acid107-92-6
Average88.1051Da
Monoisotopic88.0524295Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014079FuranC4H4OChemical structure of Furan110-00-9
Average68.074Da
Monoisotopic68.02621475Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.