Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas spadix |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoxanthomonas spadix BD-a59
Accession NumberNC_016147.2
Gene Summary
Adenine Count
555833 bp
Thymine Count
560974 bp
Guanine Count
1167727 bp
Cytosine Count
1168020 bp
Genome Length
3452554 bp
Protein-coding Genes
3138 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport periplasmic protein lpta | DSC_RS04530 | Not Available | - | 1014150 - 1014698 | 19294.8 |
| lps export abc transporter periplasmic protein lptc | DSC_RS04535 | Not Available | - | 1014676 - 1015239 | 20600.5 |
| had family hydrolase | DSC_RS04540 | Not Available | - | 1015236 - 1015784 | 19291.4 |
| kpsf/gutq family sugar-phosphate isomerase | DSC_RS04545 | Not Available | - | 1015833 - 1016840 | 34765.1 |
| bola family protein | DSC_RS04550 | Not Available | + | 1016894 - 1017124 | 8152.87 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DSC_RS04555 | Not Available | + | 1017158 - 1018429 | 44429.1 |
| hypothetical protein | DSC_RS04560 | Not Available | + | 1018426 - 1018752 | 11985.4 |
| duf3108 domain-containing protein | DSC_RS04565 | Not Available | - | 1018927 - 1019616 | 25045.1 |
| duf3108 domain-containing protein | DSC_RS04570 | Not Available | - | 1019618 - 1020403 | 28939.1 |
| phosphoribosylglycinamide formyltransferase | DSC_RS04575 | Not Available | - | 1020426 - 1021082 | 22807.7 |
Pathways
3 pathways
Biphenyl degradation
Biphenyl degradation
4-Chlorobiphenyl degradation
4-Chlorobiphenyl degradation
TCA Cycle
TCA Cycle