Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas spadix |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoxanthomonas spadix BD-a59
Accession NumberNC_016147.2
Gene Summary
Adenine Count
555833 bp
Thymine Count
560974 bp
Guanine Count
1167727 bp
Cytosine Count
1168020 bp
Genome Length
3452554 bp
Protein-coding Genes
3138 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha | DSC_RS03335 | Not Available | - | 744856 - 746415 | 61151.1 |
| mmob/dmpm family protein | DSC_RS03340 | Not Available | - | 746439 - 746708 | 9901.71 |
| aromatic/alkene monooxygenase hydroxylase subunit beta | DSC_RS03345 | Not Available | - | 746746 - 747741 | 37170.2 |
| phenol hydroxylase subunit | DSC_RS03350 | Not Available | - | 747764 - 747970 | 7609.29 |
| sigma-54-dependent fis family transcriptional regulator | DSC_RS03355 | Not Available | + | 748290 - 749972 | 62111.4 |
| type ii toxin-antitoxin system rele/pare family toxin | DSC_RS03360 | Not Available | - | 750173 - 750487 | 12549.7 |
| hypothetical protein | DSC_RS03365 | Not Available | - | 750492 - 750752 | 9703.37 |
| 30s ribosomal protein s6--l-glutamate ligase | DSC_RS03370 | Not Available | + | 750965 - 751873 | 32012.7 |
| response regulator transcription factor | DSC_RS03375 | Not Available | + | 752079 - 752756 | 24960.9 |
| hamp domain-containing sensor histidine kinase | DSC_RS03380 | Not Available | + | 752719 - 754101 | 50659.5 |
Pathways
3 pathways
Biphenyl degradation
Biphenyl degradation
4-Chlorobiphenyl degradation
4-Chlorobiphenyl degradation
TCA Cycle
TCA Cycle