Pelagimonas phthalicica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas phthalicica is a Gram-negative, rod-shaped bacterium. This organism is characterized by possessing a single replicon, which is indicative of its genetic structure. The genomic data for Pelagimonas phthalicica can be referenced through the accession number FXXP00000000.1. As a member of the microbial community, Pelagimonas phthalicica may play a role in the degradation of environmental pollutants, particularly phthalates, as its name suggests a connection to phthalic acid. Such metabolic capabilities are significant in the context of bioremediation, where microorganisms are utilized to clean up contaminated environments. The rod shape and Gram-negative classification of Pelagimonas phthalicica may also influence its ecological interactions and adaptability in various habitats. Understanding the specific roles and functions of this bacterium could enhance our knowledge of microbial ecology and the mechanisms through which certain bacteria contribute to environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas phthalicica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicibacter phthalicicus strain CECT 8649 genome assembly,

Gene Summary

Adenine Count

1009321 bp

Thymine Count

1018078 bp

Guanine Count

1414880 bp

Cytosine Count

1372614 bp

Genome Length

4814893 bp

Protein-coding Genes

4650 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
patatin-like phospholipaseTRP8649_00380Not AvailableNegative398792 - 39980836578.4
hypothetical proteinTRP8649_00381Not AvailablePositive400075 - 40195869327.1
hypothetical proteinTRP8649_00382Not AvailablePositive401955 - 40310942618.4
carboxymuconolactone decarboxylase family proteinTRP8649_00383Not AvailablePositive403568 - 40394513979.6
protocatechuate 3,4-dioxygenase beta chainTRP8649_00384Not AvailablePositive403982 - 40471027306.1
protocatechuate 3,4-dioxygenase alpha chainTRP8649_00385Not AvailablePositive404713 - 40533322819.6
3-keto-5-aminohexanoate cleavage enzymeTRP8649_00386Not AvailablePositive405385 - 40622430191.0
Trna-argNot AvailableNot AvailablePositive406516 - 406592Not Available
hth-type transcriptional regulator gntrTRP8649_00388Not AvailablePositive406714 - 40773937230.2
hypothetical proteinTRP8649_00389Not AvailablePositive407747 - 40894945819.5

Displaying genes 471 – 480 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.