Pelagimonas phthalicica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas phthalicica is a Gram-negative, rod-shaped bacterium. This organism is characterized by possessing a single replicon, which is indicative of its genetic structure. The genomic data for Pelagimonas phthalicica can be referenced through the accession number FXXP00000000.1. As a member of the microbial community, Pelagimonas phthalicica may play a role in the degradation of environmental pollutants, particularly phthalates, as its name suggests a connection to phthalic acid. Such metabolic capabilities are significant in the context of bioremediation, where microorganisms are utilized to clean up contaminated environments. The rod shape and Gram-negative classification of Pelagimonas phthalicica may also influence its ecological interactions and adaptability in various habitats. Understanding the specific roles and functions of this bacterium could enhance our knowledge of microbial ecology and the mechanisms through which certain bacteria contribute to environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas phthalicica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicibacter phthalicicus strain CECT 8649 genome assembly,

Gene Summary

Adenine Count

1009321 bp

Thymine Count

1018078 bp

Guanine Count

1414880 bp

Cytosine Count

1372614 bp

Genome Length

4814893 bp

Protein-coding Genes

4650 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-oxoadipate coa-transferase subunit bTRP8649_04692Not AvailablePositive4721621 - 472231624457.2
beta-ketoadipyl-coa thiolaseTRP8649_04693Not AvailablePositive4722313 - 472351241788.4
hth-type transcriptional regulator gbprTRP8649_04694Not AvailableNegative4723518 - 472446233911.3
3-oxoadipate enol-lactonase 2TRP8649_04695Not AvailablePositive4724511 - 472529327985.9
carboxymuconolactone decarboxylase family proteinTRP8649_04696Not AvailablePositive4725290 - 472567013889.5
protocatechuate 3,4-dioxygenase beta chainTRP8649_04697Not AvailablePositive4725670 - 472639827562.0
protocatechuate 3,4-dioxygenase alpha chainTRP8649_04698Not AvailablePositive4726400 - 472700521910.7
3-carboxy-cis,cis-muconate cycloisomeraseTRP8649_04699Not AvailablePositive4727077 - 472814138192.4
6-phosphogluconate phosphataseTRP8649_04700Not AvailableNegative4728265 - 472973754381.7
bacterial tnib proteinTRP8649_04701Not AvailableNegative4730214 - 473060314340.3

Displaying genes 4681 – 4690 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.