Pelagimonas phthalicica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas phthalicica is a Gram-negative, rod-shaped bacterium. This organism is characterized by possessing a single replicon, which is indicative of its genetic structure. The genomic data for Pelagimonas phthalicica can be referenced through the accession number FXXP00000000.1. As a member of the microbial community, Pelagimonas phthalicica may play a role in the degradation of environmental pollutants, particularly phthalates, as its name suggests a connection to phthalic acid. Such metabolic capabilities are significant in the context of bioremediation, where microorganisms are utilized to clean up contaminated environments. The rod shape and Gram-negative classification of Pelagimonas phthalicica may also influence its ecological interactions and adaptability in various habitats. Understanding the specific roles and functions of this bacterium could enhance our knowledge of microbial ecology and the mechanisms through which certain bacteria contribute to environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas phthalicica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicibacter phthalicicus strain CECT 8649 genome assembly,

Gene Summary

Adenine Count

1009321 bp

Thymine Count

1018078 bp

Guanine Count

1414880 bp

Cytosine Count

1372614 bp

Genome Length

4814893 bp

Protein-coding Genes

4650 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c-type biogenesis protein ccmh precursorTRP8649_04561Not AvailableNegative4589060 - 458952717405.3
thiol:disulfide interchange protein cycy precursorTRP8649_04562Not AvailableNegative4589524 - 459009020176.2
cytochrome c-type biogenesis protein ccmfTRP8649_04563Not AvailableNegative4590093 - 459214474668.4
ef handTRP8649_04564Not AvailablePositive4592302 - 459285319775.7
molybdopterin biosynthesis protein moebTRP8649_04565Not AvailablePositive4592893 - 459336016342.5
blue copper oxidase cueo precursorTRP8649_04566Not AvailablePositive4593422 - 459481050352.9
tvp38/tmem64 family inner membrane protein ydjzTRP8649_04567Not AvailablePositive4594949 - 459562323783.6
ubiquinol-cytochrome c reductase iron-sulfur subunitTRP8649_04568Not AvailablePositive4595708 - 459626820098.7
copper-transporting p-type atpaseTRP8649_04569Not AvailablePositive4596404 - 459874982476.4
acyl-homoserine lactone acylase quip precursorTRP8649_04570Not AvailableNegative4598910 - 460138190833.9

Displaying genes 4551 – 4560 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.