Pelagimonas phthalicica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas phthalicica is a Gram-negative, rod-shaped bacterium. This organism is characterized by possessing a single replicon, which is indicative of its genetic structure. The genomic data for Pelagimonas phthalicica can be referenced through the accession number FXXP00000000.1. As a member of the microbial community, Pelagimonas phthalicica may play a role in the degradation of environmental pollutants, particularly phthalates, as its name suggests a connection to phthalic acid. Such metabolic capabilities are significant in the context of bioremediation, where microorganisms are utilized to clean up contaminated environments. The rod shape and Gram-negative classification of Pelagimonas phthalicica may also influence its ecological interactions and adaptability in various habitats. Understanding the specific roles and functions of this bacterium could enhance our knowledge of microbial ecology and the mechanisms through which certain bacteria contribute to environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas phthalicica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicibacter phthalicicus strain CECT 8649 genome assembly,

Gene Summary

Adenine Count

1009321 bp

Thymine Count

1018078 bp

Guanine Count

1414880 bp

Cytosine Count

1372614 bp

Genome Length

4814893 bp

Protein-coding Genes

4650 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sialic acid-binding periplasmic protein siap precursorTRP8649_03579Not AvailableNegative3604000 - 360504037411.7
hypothetical proteinTRP8649_03580Not AvailablePositive3605611 - 360614118661.2
blue-light-activated proteinTRP8649_03581Not AvailablePositive3606217 - 360837679065.7
urocanate hydrataseTRP8649_03582Not AvailableNegative3608662 - 361032660048.4
n-formylglutamate amidohydrolaseTRP8649_03583Not AvailableNegative3610323 - 361113229141.3
histidine ammonia-lyaseTRP8649_03584Not AvailableNegative3611129 - 361266153451.3
imidazolonepropionaseTRP8649_03585Not AvailableNegative3612661 - 361385442140.7
8-oxoguanine deaminaseTRP8649_03586Not AvailablePositive3613930 - 361529748705.0
putative hth-type transcriptional regulator yurkTRP8649_03587Not AvailableNegative3615358 - 361604125673.7
blar1 peptidase m56TRP8649_03588Not AvailableNegative3616131 - 361726742381.2

Displaying genes 3571 – 3580 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.