Pelagimonas phthalicica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas phthalicica is a Gram-negative, rod-shaped bacterium. This organism is characterized by possessing a single replicon, which is indicative of its genetic structure. The genomic data for Pelagimonas phthalicica can be referenced through the accession number FXXP00000000.1. As a member of the microbial community, Pelagimonas phthalicica may play a role in the degradation of environmental pollutants, particularly phthalates, as its name suggests a connection to phthalic acid. Such metabolic capabilities are significant in the context of bioremediation, where microorganisms are utilized to clean up contaminated environments. The rod shape and Gram-negative classification of Pelagimonas phthalicica may also influence its ecological interactions and adaptability in various habitats. Understanding the specific roles and functions of this bacterium could enhance our knowledge of microbial ecology and the mechanisms through which certain bacteria contribute to environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas phthalicica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicibacter phthalicicus strain CECT 8649 genome assembly,

Gene Summary

Adenine Count

1009321 bp

Thymine Count

1018078 bp

Guanine Count

1414880 bp

Cytosine Count

1372614 bp

Genome Length

4814893 bp

Protein-coding Genes

4650 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbon monoxide dehydrogenase small chainTRP8649_02059Not AvailableNegative2073365 - 207385917719.3
carbon monoxide dehydrogenase medium chainTRP8649_02060Not AvailableNegative2073874 - 207472829892.7
co-responsive transcriptional regulator rcomTRP8649_02061Not AvailableNegative2074840 - 207596740507.2
fructose-bisphosphate aldolaseTRP8649_02062Not AvailableNegative2076065 - 207690729763.6
5-deoxy-glucuronate isomeraseTRP8649_02063Not AvailableNegative2076904 - 207774031143.7
5-dehydro-2-deoxygluconokinaseTRP8649_02064Not AvailableNegative2077752 - 207873234287.6
glucose-6-phosphate 3-dehydrogenaseTRP8649_02065Not AvailablePositive2078866 - 207996939812.4
putative oxidoreductase ycjsTRP8649_02066Not AvailablePositive2080050 - 208120741679.5
ribose operon repressorTRP8649_02067Not AvailableNegative2081218 - 208221635994.2
hydroxypyruvate isomeraseTRP8649_02068Not AvailableNegative2082331 - 208311028414.1

Displaying genes 2091 – 2100 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.