Pelagimonas phthalicica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas phthalicica is a Gram-negative, rod-shaped bacterium. This organism is characterized by possessing a single replicon, which is indicative of its genetic structure. The genomic data for Pelagimonas phthalicica can be referenced through the accession number FXXP00000000.1. As a member of the microbial community, Pelagimonas phthalicica may play a role in the degradation of environmental pollutants, particularly phthalates, as its name suggests a connection to phthalic acid. Such metabolic capabilities are significant in the context of bioremediation, where microorganisms are utilized to clean up contaminated environments. The rod shape and Gram-negative classification of Pelagimonas phthalicica may also influence its ecological interactions and adaptability in various habitats. Understanding the specific roles and functions of this bacterium could enhance our knowledge of microbial ecology and the mechanisms through which certain bacteria contribute to environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas phthalicica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicibacter phthalicicus strain CECT 8649 genome assembly,

Gene Summary

Adenine Count

1009321 bp

Thymine Count

1018078 bp

Guanine Count

1414880 bp

Cytosine Count

1372614 bp

Genome Length

4814893 bp

Protein-coding Genes

4650 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oligopeptide transport system permease protein oppcTRP8649_02019Not AvailableNegative2032583 - 203346731650.9
glutathione transport system permease protein gsicTRP8649_02020Not AvailableNegative2033480 - 203439733170.4
glutathione-binding protein gsib precursorTRP8649_02021Not AvailableNegative2034455 - 203596955947.6
putative hth-type transcriptional regulator ydfhTRP8649_02022Not AvailablePositive2036281 - 203694625152.1
hth-type transcriptional regulator iscrTRP8649_02023Not AvailableNegative2036963 - 203734313339.3
antiseptic resistance proteinTRP8649_02024Not AvailablePositive2037493 - 203895351115.1
hth-type transcriptional regulator lutrTRP8649_02025Not AvailablePositive2039095 - 203983227561.0
lactate-binding periplasmic protein precursorTRP8649_02026Not AvailablePositive2040095 - 204111736490.0
tripartite atp-independent periplasmic transporters, dctq componentTRP8649_02027Not AvailablePositive2041223 - 204182823034.3
sialic acid trap transporter permease protein siatTRP8649_02028Not AvailablePositive2041850 - 204343355988.3

Displaying genes 2051 – 2060 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.