Pelagimonas phthalicica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas phthalicica is a Gram-negative, rod-shaped bacterium. This organism is characterized by possessing a single replicon, which is indicative of its genetic structure. The genomic data for Pelagimonas phthalicica can be referenced through the accession number FXXP00000000.1. As a member of the microbial community, Pelagimonas phthalicica may play a role in the degradation of environmental pollutants, particularly phthalates, as its name suggests a connection to phthalic acid. Such metabolic capabilities are significant in the context of bioremediation, where microorganisms are utilized to clean up contaminated environments. The rod shape and Gram-negative classification of Pelagimonas phthalicica may also influence its ecological interactions and adaptability in various habitats. Understanding the specific roles and functions of this bacterium could enhance our knowledge of microbial ecology and the mechanisms through which certain bacteria contribute to environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas phthalicica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicibacter phthalicicus strain CECT 8649 genome assembly,

Gene Summary

Adenine Count

1009321 bp

Thymine Count

1018078 bp

Guanine Count

1414880 bp

Cytosine Count

1372614 bp

Genome Length

4814893 bp

Protein-coding Genes

4650 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyl-diaminopimelate desuccinylaseTRP8649_00050Not AvailablePositive51726 - 5300346947.1
pantothenate synthetaseTRP8649_00051Not AvailableNegative53069 - 5391130802.9
3-methyl-2-oxobutanoate hydroxymethyltransferaseTRP8649_00052Not AvailableNegative53911 - 5474129032.3
periplasmic dipeptide transport protein precursorTRP8649_00053Not AvailablePositive54940 - 5641253250.3
alcohol dehydrogenaseTRP8649_00054Not AvailableNegative56416 - 5803559267.8
acyl-homoserine-lactone synthaseTRP8649_00055Not AvailableNegative58225 - 5908531491.5
transcriptional activator protein esarTRP8649_00056Not AvailableNegative59168 - 5986925899.8
transcriptional repressor dicaTRP8649_00057Not AvailableNegative59915 - 6028313524.2
rutc family proteinTRP8649_00058Not AvailableNegative60509 - 6091014609.7
acyl-coa thioesterase ybgcTRP8649_00059Not AvailableNegative60907 - 6131415238.3

Displaying genes 141 – 150 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.