Pelagimonas phthalicica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas phthalicica is a Gram-negative, rod-shaped bacterium. This organism is characterized by possessing a single replicon, which is indicative of its genetic structure. The genomic data for Pelagimonas phthalicica can be referenced through the accession number FXXP00000000.1. As a member of the microbial community, Pelagimonas phthalicica may play a role in the degradation of environmental pollutants, particularly phthalates, as its name suggests a connection to phthalic acid. Such metabolic capabilities are significant in the context of bioremediation, where microorganisms are utilized to clean up contaminated environments. The rod shape and Gram-negative classification of Pelagimonas phthalicica may also influence its ecological interactions and adaptability in various habitats. Understanding the specific roles and functions of this bacterium could enhance our knowledge of microbial ecology and the mechanisms through which certain bacteria contribute to environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas phthalicica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicibacter phthalicicus strain CECT 8649 genome assembly,

Gene Summary

Adenine Count

1009321 bp

Thymine Count

1018078 bp

Guanine Count

1414880 bp

Cytosine Count

1372614 bp

Genome Length

4814893 bp

Protein-coding Genes

4650 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinTRP8649_01339Not AvailablePositive1366949 - 136829549374.2
hypothetical proteinTRP8649_01340Not AvailableNegative1368368 - 137014663987.3
pap2 superfamily proteinTRP8649_01341Not AvailableNegative1370160 - 137120337036.2
homoserine kinaseTRP8649_01342Not AvailableNegative1371454 - 137240134715.4
5-aminovalerate aminotransferase davtTRP8649_01343Not AvailableNegative1372398 - 137368746937.1
ribonuclease bnTRP8649_01344Not AvailableNegative1373684 - 137454131095.1
taurine--pyruvate aminotransferaseTRP8649_01345Not AvailableNegative1374553 - 137589947954.2
transcriptional regulator kdgrTRP8649_01346Not AvailableNegative1375896 - 137670528615.9
tripartite tricarboxylate transporter family receptorTRP8649_01347Not AvailablePositive1376819 - 137776332826.1
tripartite tricarboxylate transporter tctb family proteinTRP8649_01348Not AvailablePositive1377834 - 137837320117.0

Displaying genes 1421 – 1430 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.