Pelagimonas phthalicica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas phthalicica is a Gram-negative, rod-shaped bacterium. This organism is characterized by possessing a single replicon, which is indicative of its genetic structure. The genomic data for Pelagimonas phthalicica can be referenced through the accession number FXXP00000000.1. As a member of the microbial community, Pelagimonas phthalicica may play a role in the degradation of environmental pollutants, particularly phthalates, as its name suggests a connection to phthalic acid. Such metabolic capabilities are significant in the context of bioremediation, where microorganisms are utilized to clean up contaminated environments. The rod shape and Gram-negative classification of Pelagimonas phthalicica may also influence its ecological interactions and adaptability in various habitats. Understanding the specific roles and functions of this bacterium could enhance our knowledge of microbial ecology and the mechanisms through which certain bacteria contribute to environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas phthalicica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicibacter phthalicicus strain CECT 8649 genome assembly,

Gene Summary

Adenine Count

1009321 bp

Thymine Count

1018078 bp

Guanine Count

1414880 bp

Cytosine Count

1372614 bp

Genome Length

4814893 bp

Protein-coding Genes

4650 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
copper-exporting p-type atpase aTRP8649_01279Not AvailableNegative1299846 - 130203276310.8
fixhTRP8649_01280Not AvailableNegative1302029 - 130249917112.6
quinol dehydrogenase membrane componentTRP8649_01281Not AvailableNegative1302496 - 130400757730.1
hth-type transcriptional activator amprTRP8649_01282Not AvailableNegative1304027 - 130490231548.1
hypothetical proteinTRP8649_01283Not AvailablePositive1304998 - 13051475685.91
putative diguanylate cyclase adraTRP8649_01284Not AvailableNegative1305306 - 130676953526.2
cbb3-type cytochrome c oxidase subunit ccopTRP8649_01285Not AvailableNegative1306904 - 130778231641.2
cbb3-type cytochrome oxidase component fixqTRP8649_01286Not AvailableNegative1307797 - 13079947361.71
cytochrome c oxidase, mono-heme subunit/fixoTRP8649_01287Not AvailableNegative1308006 - 130873427285.4
hypothetical proteinTRP8649_01288Not AvailableNegative1308749 - 131035960112.9

Displaying genes 1361 – 1370 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.