Nocardioides sp. LS1 str. strain LS1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. LS1, designated as strain LS1, is a bacterium notable for its single replicon structure, which is characteristic of many members within the genus Nocardioides. This strain is cataloged under the accession number BIFF00000000.1, indicating its genetic sequences and related information are documented for scientific study. The genus Nocardioides is known for its contribution to various ecological processes, particularly in the degradation of complex organic compounds. Strains like Nocardioides sp. LS1 play a significant role in biogeochemical cycles, particularly in soil ecosystems where they contribute to the breakdown of organic matter. This biological activity can facilitate nutrient cycling and promote soil health. In terms of ecological insights, Nocardioides species are often found in diverse environments, including soil and aquatic systems, where they may engage in symbiotic relationships with other microorganisms. This interaction can enhance the degradation of pollutants and improve soil fertility, making them valuable in bioremediation efforts. Overall, Nocardioides sp. LS1 exemplifies the functional diversity found within the Nocardioides genus, highlighting its potential importance in environmental microbiology and ecosystem functioning.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. LS1
Strainstrain LS1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. LS1 DNA, contig_7, whole genome shotgun sequence.

Gene Summary

Adenine Count

648794 bp

Thymine Count

652590 bp

Guanine Count

1630994 bp

Cytosine Count

1604375 bp

Genome Length

4536969 bp

Protein-coding Genes

4368 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative thiamine-phosphate synthaseNLS1_28540Not AvailablePositive2972249 - 297280919413.3
hydroxymethylpyrimidine/phosphomethylpyrimidine kinaseNLS1_28550Not AvailablePositive2972806 - 297360326558.6
phosphomethylpyrimidine synthaseNLS1_28560Not AvailablePositive2973600 - 297527360990.8
hypothetical proteinNLS1_28570Not AvailableNegative2975725 - 29759498086.5
atp-dependent clp protease atp-binding subunit clpxNLS1_28580Not AvailableNegative2977733 - 297901646441.1
atp-dependent clp protease proteolytic subunit 2NLS1_28590Not AvailableNegative2979119 - 297973022597.0
atp-dependent clp protease proteolytic subunitNLS1_28600Not AvailableNegative2979733 - 298037423033.5
hypothetical proteinNLS1_28610Not AvailableNegative2980464 - 298093417015.6
hypothetical proteinNLS1_28620Not AvailableNegative2980942 - 298212041564.7
trigger factorNLS1_28630Not AvailableNegative2982351 - 298374250786.0

Displaying genes 2891 – 2900 of 4419 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.