Sporosarcina newyorkensis 2681

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Sporosarcina

Description

Sporosarcina newyorkensis 2681 is a Gram-positive bacterium characterized by its rod shape. This species is notable for possessing a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number AFPZ00000000.1, which provides a reference for its genetic information. The Gram-positive nature of Sporosarcina newyorkensis 2681 suggests that it possesses a thick peptidoglycan layer in its cell wall, a characteristic that is often associated with resilience to certain environmental stresses and influences its interaction with other microorganisms. Such traits can play a significant role in its ecological niche, particularly in soil or other environments where microbial competition is prevalent. The rod shape of this bacterium may confer advantages in motility and nutrient acquisition, potentially allowing it to thrive in diverse habitats. Given that Sporosarcina species are often found in soil environments, their ability to adapt to different ecological conditions can be critical for their survival and function within microbial communities. Overall, the traits exhibited by Sporosarcina newyorkensis 2681 underscore its potential role in various biological processes, including nutrient cycling and interaction with other soil microorganisms. The presence of a single replicon may also suggest evolutionary adaptations that allow this bacterium to maintain stability and efficiency in its genomic operations, further emphasizing its ecological significance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusSporosarcina
SpeciesSporosarcina newyorkensis
Strain2681

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sporosarcina newyorkensis 2681 contig00163, whole genome shotgun

Gene Summary

Adenine Count

1016399 bp

Thymine Count

1082304 bp

Guanine Count

703875 bp

Cytosine Count

824829 bp

Genome Length

3627407 bp

Protein-coding Genes

3755 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar basal-body rod protein flgbHMPREF9372_0649P24500Negative577513 - 57790214332.8
gtp-sensing transcriptional pleiotropic repressor codyHMPREF9372_0650B1HQV3Negative578407 - 57918328928.9
atp-dependent hsl protease atp-binding subunit hsluHMPREF9372_0651P39778Negative579270 - 58066752670.7
atp-dependent protease hslvuHMPREF9372_0652B7IUI9Negative580668 - 58120419221.3
site-specific tyrosine recombinase xercHMPREF9372_0653P39776Negative581216 - 58211535264.4
trna:m(5)u-54 methyltransferaseHMPREF9372_0654B1HQJ3Negative582451 - 58382750680.9
dna topoisomerase topaHMPREF9372_0655P39814Negative583799 - 58587478988.6
smf family dna processing proteinHMPREF9372_0656P39813Negative586000 - 58687832763.9
succinyl-coa synthetase subunit alphaHMPREF9372_0657P80865Negative586952 - 58785431574.3
succinyl-coa ligase subunit betaHMPREF9372_0658C5D8V2Negative587873 - 58904842302.3

Displaying genes 771 – 780 of 3901 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

236 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm00004573,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneC19H24O4Chemical structure of 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneNot available
Average316.3915Da
Monoisotopic316.1674593Da

Displaying 1–10 of 236 metabolites

Health Effects

No health effects information available for this bacterium.