Fervidobacterium thailandense str. FC2004

rodanaerobic

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Thermotogales

Family

Fervidobacteriaceae

Genus

Fervidobacterium

Description

Fervidobacterium thailandense strain FC2004 is a thermophilic, rod-shaped bacterium that thrives in anaerobic conditions. This organism is classified as an organotroph, utilizing organic compounds as its primary energy source. It has an optimal growth temperature of 45 degrees Celsius, indicating its preference for high-temperature environments typically associated with geothermal or hot spring habitats. The genetic makeup of F. thailandense FC2004 is characterized by the presence of a single replicon, as indicated by its accession number LWAF00000000.1. This feature may have implications for its genetic stability and adaptability in its thermal ecological niche. The anaerobic lifestyle of Fervidobacterium thailandense FC2004 suggests its role in biogeochemical cycles, particularly in environments where oxygen is scarce. Such conditions are often found in deep-sea hydrothermal vents, hot springs, or other geothermal areas. The ability to metabolize organic substrates in these environments contributes to the degradation of organic matter, potentially influencing nutrient cycling and energy flow within thermophilic microbial communities. In summary, Fervidobacterium thailandense strain FC2004 exemplifies the adaptations of thermophilic anaerobes to extreme environments, emphasizing their ecological significance in organic matter decomposition and nutrient recycling in anaerobic ecosystems.

Taxonomy

KingdomThermotogati
PhylumThermotogota
ClassThermotogae
OrderThermotogales
FamilyFervidobacteriaceae
GenusFervidobacterium
SpeciesFervidobacterium thailandense
StrainFC2004

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature45
Temperature rangethermophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceorganotroph
PathogenicityNot Available

Genome Summary

Fervidobacterium thailandense strain FC2004 contig00055, whole

Gene Summary

Adenine Count

556049 bp

Thymine Count

549667 bp

Guanine Count

463701 bp

Cytosine Count

470793 bp

Genome Length

2040210 bp

Protein-coding Genes

1842 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
b12-binding domain-containing radical sam proteinA4H02_00045Q58882Negative6482 - 768744561.7
hypothetical proteinA4H02_00050Not AvailableNegative7693 - 79419175.37
redox-regulated atpase ychfA4H02_00055Q7VMI2Negative7977 - 904140038.5
trna pseudouridine(55) synthase trubA4H02_00060A6LLV6Negative9058 - 1001736116.3
phenylalanine--trna ligase subunit alphaA4H02_00065A7HLU6Negative10074 - 1105438553.4
duf368 domain-containing proteinA4H02_00070Not AvailableNegative11068 - 1190130079.3
metallophosphataseA4H02_00075Q8ERS7Negative11903 - 1254724421.3
phosphohydrolaseA4H02_00085O07521Negative14620 - 1560337292.8
alanine racemaseA4H02_00090B8D0W1Negative15600 - 1669440888.2
hypothetical proteinA4H02_00095Not AvailableNegative16730 - 1706813238.6

Displaying genes 11 – 20 of 1893 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

107 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 107 metabolites

Health Effects

No health effects information available for this bacterium.