Companilactobacillus ginsenosidimutans str. EMML 3041

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Companilactobacillus

Description

Companilactobacillus ginsenosidimutans str. EMML 3041 is characterized by its rod-shaped morphology and the presence of flagella, which may contribute to its motility and ability to navigate its environment. This bacterium is notable for having a single replicon, indicating a streamlined genetic organization that could be advantageous for its metabolic efficiency and adaptability. The strain has been assigned the accession number NZ_CP012034.1, which allows for its genetic information to be referenced and compared with other microbial genomes. This accession provides a pathway for further research into its genetic makeup, potential functions, and ecological roles. Understanding the characteristics of Companilactobacillus ginsenosidimutans str. EMML 3041 can shed light on its ecological niche, particularly in relation to its interactions with other microorganisms and its role in various environments. The combination of its rod shape and flagella suggests that it may thrive in dynamic ecosystems where motility could be crucial for nutrient acquisition or competition with other species. This strain's specific adaptations may also offer insights into its potential applications in biotechnology or industry, particularly in fermentation processes where its motility and metabolic capabilities can be harnessed.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusCompanilactobacillus
SpeciesCompanilactobacillus ginsenosidimutans
StrainEMML 3041

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Companilactobacillus ginsenosidimutans strain EMML 3041

Gene Summary

Adenine Count

820169 bp

Thymine Count

819469 bp

Guanine Count

475185 bp

Cytosine Count

475733 bp

Genome Length

2590556 bp

Protein-coding Genes

2410 genes

Non-Coding Genes

192 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is200/is605 family transposaseABM34_RS12535Q7DF83Negative2532970 - 253339816428.1
rna-guided endonuclease tnpb family proteinABM34_RS12540P54992Positive2533461 - 253463045832.1
aaa family atpaseABM34_RS12545Not AvailablePositive2534656 - 253558536610.2
glycerophosphodiester phosphodiesteraseABM34_RS12550Not AvailableNegative2535985 - 253685132548.5
excinuclease abc subunit uvraABM34_RS12555Not AvailableNegative2536877 - 253941492641.5
alcohol dehydrogenase catalytic domain-containing proteinABM34_RS13420Not AvailablePositive2539613 - 254011317903.5
zinc-binding dehydrogenaseABM34_RS13425Not AvailablePositive2540120 - 254056316383.6
merr family transcriptional regulatorABM34_RS12565Not AvailablePositive2540587 - 254139930855.7
mmcq/yjbr family dna-binding proteinABM34_RS12570Not AvailablePositive2541431 - 254177513417.2
peroxiredoxinABM34_RS12575P80239Negative2541919 - 254247921103.6

Displaying genes 2571 – 2580 of 2602 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

140 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da

Displaying 1–10 of 140 metabolites

Health Effects

No health effects information available for this bacterium.