Aeromonas cavernicola str. MDC 2508

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Aeromonas

Description

Aeromonas cavernicola strain MDC 2508 is a rod-shaped bacterium characterized by the presence of flagella. This feature suggests that the organism is motile, which can play a significant role in its ecological interactions and survival in various environments. The strain possesses a single replicon, indicating a streamlined genetic architecture that may contribute to its adaptability. The genomic data for Aeromonas cavernicola str. MDC 2508 is cataloged under the accession number PGGC00000000.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications in microbiology. As a member of the Aeromonas genus, which is known for its environmental versatility, A. cavernicola may have important implications in ecological systems, particularly in aquatic environments where it can be part of the microbial community. The motility conferred by its flagella allows it to navigate through water and potentially interact with other microorganisms, contributing to nutrient cycling and ecosystem dynamics. Understanding the traits of A. cavernicola, such as its morphology and genetic structure, may provide insights into its ecological roles and the broader implications for microbial diversity in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusAeromonas
SpeciesAeromonas cavernicola
StrainMDC 2508

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aeromonas cavernicola str. MDC 2508


Gene Summary

Adenine Count

892232 bp

Thymine Count

892925 bp

Guanine Count

1053230 bp

Cytosine Count

1049213 bp

Genome Length

3887629 bp

Protein-coding Genes

3507 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative 2-aminoethylphosphonate abc transporter permease subunitCUC53_00005Not AvailablePositive1 - 114041727.9
16s ribosomal rnaNot AvailableNot AvailablePositive213 - 1763Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive279 - 393Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive338 - 3255Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive358 - 472Not Available
hypothetical proteinCUC53_00015Not AvailablePositive1850 - 230817084.1
Ncrna_class:otherNot AvailableNot AvailablePositive2759 - 2941Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive3354 - 3468Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive3772 - 3886Not Available
sulfataseCUC53_00025Not AvailableNegative2618 - 489184156.2

Displaying genes 1 – 10 of 3591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

23 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm0003841N-[(R)-4-phosphopantothenoyl]-L-cysteineC12H20N2O9PSChemical structure of N-[(R)-4-phosphopantothenoyl]-L-cysteineNot available
Average399.33Da
Monoisotopic399.064359144Da

Displaying 1–10 of 23 metabolites

Health Effects

No health effects information available for this bacterium.