Kosakonia oryziphila

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Kosakonia

Description

Kosakonia oryziphila is a bacterial species characterized by a single replicon, which indicates that its genetic material is organized within a single circular chromosome. The genome of Kosakonia oryziphila is represented by the accession number FMBC00000000.1. This bacterium is notable for its ecological interactions, particularly in association with plants. Its ability to colonize various plant tissues suggests that it may play a role in plant health and microbial dynamics within the rhizosphere. The single replicon structure may also imply certain advantages in terms of genetic stability and adaptability in its environment. In summary, Kosakonia oryziphila is defined by its single-replicon genome and its ecological relevance, particularly within plant-associated environments. Understanding its genetic organization and ecological role could provide insights into its potential benefits in agricultural contexts or its function in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKosakonia
SpeciesKosakonia oryziphila
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Kosakonia oryziphila
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Enterobacter oryziphilus strain REICA_142 genome assembly, contig:

Gene Summary

Adenine Count

1133281 bp

Thymine Count

1139808 bp

Guanine Count

1275926 bp

Cytosine Count

1262060 bp

Genome Length

4814900 bp

Protein-coding Genes

4485 genes

Non-Coding Genes

263 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
high frequency lysogenization proteinGA0061070_103030Not AvailableNegative3027554 - 302818322579.5
trna (5-methylaminomethyl-2-thiouridylate)-methyltransferaseGA0061070_103031Not AvailableNegative3028257 - 302936340971.8
phosphatase nudjGA0061070_103032Not AvailableNegative3029482 - 302993417287.6
23s rrna pseudouridine2457 synthaseGA0061070_103033Not AvailableNegative3029927 - 303062226147.2
isocitrate dehydrogenase (nadp)GA0061070_103034Not AvailablePositive3030782 - 303203245746.5
hypothetical proteinGA0061070_103035Not AvailablePositive3032268 - 303257311366.6
pts system n-acetylmuramate-specific iib component, glc family (tc 4.a.1.2.7)/pts system n-acetylmuramate-specific iic component, glc family (tc 4.a.1.2.7)GA0061070_103036Not AvailableNegative3032570 - 303402151660.9
n-acetylmuramic acid 6-phosphate etheraseGA0061070_103037Not AvailableNegative3034024 - 303492931747.3
transcriptional regulator, rpir familyGA0061070_103038Not AvailablePositive3035159 - 303601931576.3
beta-n-acetylhexosaminidaseGA0061070_103039Not AvailablePositive3036385 - 303825668445.4

Displaying genes 3101 – 3110 of 4748 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.