Kosakonia oryziphila

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Kosakonia

Description

Kosakonia oryziphila is a bacterial species characterized by a single replicon, which indicates that its genetic material is organized within a single circular chromosome. The genome of Kosakonia oryziphila is represented by the accession number FMBC00000000.1. This bacterium is notable for its ecological interactions, particularly in association with plants. Its ability to colonize various plant tissues suggests that it may play a role in plant health and microbial dynamics within the rhizosphere. The single replicon structure may also imply certain advantages in terms of genetic stability and adaptability in its environment. In summary, Kosakonia oryziphila is defined by its single-replicon genome and its ecological relevance, particularly within plant-associated environments. Understanding its genetic organization and ecological role could provide insights into its potential benefits in agricultural contexts or its function in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKosakonia
SpeciesKosakonia oryziphila
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Kosakonia oryziphila
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Enterobacter oryziphilus strain REICA_142 genome assembly, contig:

Gene Summary

Adenine Count

1133281 bp

Thymine Count

1139808 bp

Guanine Count

1275926 bp

Cytosine Count

1262060 bp

Genome Length

4814900 bp

Protein-coding Genes

4485 genes

Non-Coding Genes

263 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc-type fe3+/spermidine/putrescine transport systems, atpase componentsGA0061070_10274Not AvailablePositive2805189 - 280617536121.9
abc-type uncharacterized transport system ynjbcd, substrate-binding proteinGA0061070_10275Not AvailablePositive2806210 - 280735541548.6
abc-type sugar transport system, permease componentGA0061070_10276Not AvailablePositive2807420 - 280825330150.5
abc-type spermidine/putrescine transport system, permease component iiGA0061070_10277Not AvailablePositive2808250 - 280907130131.8
family of unknown functionGA0061070_10278Not AvailableNegative2809172 - 280945310243.8
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinGA0061070_10279Not AvailablePositive2809998 - 281136252015.2
sensor c-di-gmp phosphodiesterase, contains css-motif sensor and eal domainGA0061070_102710Not AvailablePositive2811702 - 281327359233.0
transcriptional regulator, arac familyGA0061070_102711Not AvailableNegative2813986 - 281430912956.6
merr family transcriptional regulator, redox-sensitive transcriptional activator soxrGA0061070_102712Not AvailablePositive2814391 - 281484917024.7
putative mfs transporter, agza family, xanthine/uracil permeaseGA0061070_102714Not AvailablePositive2815558 - 281690745653.4

Displaying genes 2891 – 2900 of 4748 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.