Hafnia alvei ATCC 51873

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Hafnia alvei ATCC 51873 is a gram-negative, facultative anaerobic bacterium characterized by its rod-shaped morphology. This species is part of the Enterobacteriaceae family and is known for its adaptive metabolic capabilities, which allow it to thrive in both aerobic and anaerobic environments. Hafnia alvei ATCC 51873 possesses a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and survival in varied ecological niches. The strain is cataloged under the accession number AGCI00000000.1, which provides a reference for its genomic information. Ecologically, Hafnia alvei is often isolated from the gastrointestinal tracts of animals and humans, suggesting a role in the microbiota of these hosts. Its presence in diverse environments highlights its potential significance in nutrient cycling and interactions within microbial communities. The facultative anaerobic nature of this bacterium allows it to exploit a range of substrates, contributing to its survival and proliferation in fluctuating conditions. Understanding the traits of Hafnia alvei ATCC 51873 may provide insights into its ecological roles and potential applications in biotechnology or medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
StrainATCC 51873

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia alvei ATCC 51873
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei ATCC 51873 H_alveiATCC51873-1.0_Cont602.1, whole

Gene Summary

Adenine Count

1265814 bp

Thymine Count

1262255 bp

Guanine Count

1172649 bp

Cytosine Count

1181591 bp

Genome Length

4882309 bp

Protein-coding Genes

4678 genes

Non-Coding Genes

337 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vitamin b12 import system permease protein btucHMPREF0454_00534Not AvailableNegative556121 - 55714636932.0
putative protein dsrbHMPREF0454_00535Not AvailableNegative557182 - 5573797430.68
integration host factor, alpha subunitHMPREF0454_00536Not AvailableNegative557462 - 55775811213.5
phenylalanine--trna ligase, beta subunitHMPREF0454_00537Not AvailableNegative557763 - 56015087343.1
phenylalanine--trna ligase, alpha subunitHMPREF0454_00538Not AvailableNegative560165 - 56114837121.3
ribosomal protein l20HMPREF0454_00539Not AvailableNegative561781 - 56213713515.7
ribosomal protein l35HMPREF0454_00540Not AvailableNegative562180 - 5623777236.21
translation initiation factor if-3HMPREF0454_00541Not AvailableNegative562476 - 56289215897.5
threonine--trna ligaseHMPREF0454_00542Not AvailableNegative563014 - 56495174277.5
hypothetical proteinHMPREF0454_00543Not AvailablePositive565652 - 5657714680.61

Displaying genes 831 – 840 of 5015 in total

Metabolites

705 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da

Displaying 1–10 of 705 metabolites

Health Effects

No health effects information available for this bacterium.