Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | ATCC 51873 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265814 bp
Thymine Count
1262255 bp
Guanine Count
1172649 bp
Cytosine Count
1181591 bp
Genome Length
4882309 bp
Protein-coding Genes
4678 genes
Non-Coding Genes
337 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamb/ycsf family protein | HMPREF0454_04515 | Not Available | Positive | 4385589 - 4386323 | 26686.9 |
| putative dna-formamidopyrimidine glycosylase | HMPREF0454_04516 | Not Available | Positive | 4386393 - 4387184 | 30142.4 |
| citrate (si)-synthase | HMPREF0454_04517 | Not Available | Negative | 4387254 - 4388573 | 49415.2 |
| succinate dehydrogenase, cytochrome b556 subunit | HMPREF0454_04518 | Not Available | Positive | 4389369 - 4389758 | 14025.6 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | HMPREF0454_04519 | Not Available | Positive | 4389752 - 4390114 | 13343.8 |
| succinate dehydrogenase, flavoprotein subunit | HMPREF0454_04520 | Not Available | Positive | 4390116 - 4391897 | 64909.2 |
| succinate dehydrogenase iron-sulfur subunit | HMPREF0454_04521 | Not Available | Positive | 4391948 - 4392664 | 26857.5 |
| oxoglutarate dehydrogenase (succinyl-transferring), e1 component | HMPREF0454_04522 | Not Available | Positive | 4392989 - 4395799 | 105801.0 |
| dihydrolipoyllysine-residue succinyltransferase, e2 component of oxoglutarate dehydrogenase complex | HMPREF0454_04523 | Not Available | Positive | 4395874 - 4397088 | 43822.0 |
| succinate-coa ligase, beta subunit | HMPREF0454_04524 | Not Available | Positive | 4397314 - 4398480 | 41397.1 |
Pathways
1385 pathways
Health Effects
No health effects information available for this bacterium.


