Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | ATCC 51873 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265814 bp
Thymine Count
1262255 bp
Guanine Count
1172649 bp
Cytosine Count
1181591 bp
Genome Length
4882309 bp
Protein-coding Genes
4678 genes
Non-Coding Genes
337 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system effector, hcp1 family | HMPREF0454_03985 | Not Available | Negative | 3860028 - 3860519 | 18577.9 |
| ompa family protein | HMPREF0454_03986 | Not Available | Negative | 3860608 - 3862302 | 62038.2 |
| type iv / vi secretion system protein, dotu family | HMPREF0454_03987 | Not Available | Negative | 3862315 - 3862974 | 25095.3 |
| type vi secretion protein, vc_a0114 family | HMPREF0454_03988 | Not Available | Negative | 3862971 - 3864320 | 49744.1 |
| type vi secretion protein, evpb/vc_a0108 family | HMPREF0454_03989 | Not Available | Negative | 3864338 - 3865891 | 57924.7 |
| type vi secretion protein, vc_a0107 family | HMPREF0454_03990 | Not Available | Negative | 3865917 - 3866417 | 18529.2 |
| hypothetical protein | HMPREF0454_03991 | Not Available | Negative | 3866661 - 3866780 | 4731.98 |
| hypothetical protein | HMPREF0454_03992 | Not Available | Positive | 3866947 - 3867075 | 4995.9 |
| hypothetical protein | HMPREF0454_03993 | Not Available | Negative | 3867160 - 3867339 | 7041.74 |
| autoinducer binding domain protein | HMPREF0454_03994 | Not Available | Positive | 3867634 - 3868374 | 28012.9 |
Pathways
1385 pathways
Health Effects
No health effects information available for this bacterium.


