Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | ATCC 51873 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265814 bp
Thymine Count
1262255 bp
Guanine Count
1172649 bp
Cytosine Count
1181591 bp
Genome Length
4882309 bp
Protein-coding Genes
4678 genes
Non-Coding Genes
337 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase | HMPREF0454_03875 | Not Available | Negative | 3760149 - 3761627 | 52561.8 |
| 5-carboxymethyl-2-hydroxymuconate delta isomerase | HMPREF0454_03876 | Not Available | Negative | 3761715 - 3762098 | 14514.5 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | HMPREF0454_03877 | Not Available | Negative | 3762108 - 3762704 | 22408.6 |
| hypothetical protein | HMPREF0454_03878 | Not Available | Positive | 3762717 - 3762911 | 6831.18 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | HMPREF0454_03879 | Not Available | Negative | 3763034 - 3764500 | 53321.1 |
| 4-hydroxyphenylacetate degradation isomerase/decarboxylase, subunit | HMPREF0454_03880 | Not Available | Negative | 3764497 - 3765261 | 28619.0 |
| 4-hydroxyphenylacetate degradation isomerase/decarboxylase, subunit | HMPREF0454_03881 | Not Available | Negative | 3765258 - 3765902 | 22997.5 |
| homoprotocatechuate degradation operon regulator, hpar | HMPREF0454_03882 | Not Available | Positive | 3766242 - 3766715 | 17894.7 |
| hypothetical protein | HMPREF0454_03883 | Not Available | Positive | 3766972 - 3767610 | 24764.2 |
| hypothetical protein | HMPREF0454_03884 | Not Available | Positive | 3767720 - 3767863 | 5610.0 |
Pathways
1385 pathways
Health Effects
No health effects information available for this bacterium.


