Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | ATCC 51873 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265814 bp
Thymine Count
1262255 bp
Guanine Count
1172649 bp
Cytosine Count
1181591 bp
Genome Length
4882309 bp
Protein-coding Genes
4678 genes
Non-Coding Genes
337 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoadipyl coa thiolase | HMPREF0454_02178 | Not Available | Positive | 2113138 - 2114343 | 42235.0 |
| phenylacetate-coa ligase | HMPREF0454_02179 | Not Available | Positive | 2114403 - 2115728 | 49561.6 |
| phenylacetic acid degradation operon negative regulatory protein paax | HMPREF0454_02180 | Not Available | Positive | 2115842 - 2116783 | 36158.2 |
| phenylacetic acid degradation protein paay | HMPREF0454_02181 | Not Available | Positive | 2116796 - 2117392 | 21385.7 |
| cyclic diguanylate phosphodiesterase domain protein | HMPREF0454_02182 | Not Available | Negative | 2117505 - 2120087 | 97078.6 |
| diguanylate cyclase domain protein | HMPREF0454_02183 | Not Available | Negative | 2120100 - 2121125 | 39553.7 |
| gtp diphosphokinase | HMPREF0454_02184 | Not Available | Negative | 2121465 - 2123708 | 84820.6 |
| 23s rrna (uracil-5-)-methyltransferase ruma | HMPREF0454_02185 | Not Available | Negative | 2123742 - 2125028 | 47456.8 |
| signal transduction histidine-protein kinase bara | HMPREF0454_02186 | Not Available | Positive | 2125135 - 2127876 | 102788.0 |
| hypothetical protein | HMPREF0454_02187 | Not Available | Positive | 2127915 - 2128583 | 24839.7 |
Pathways
1385 pathways
Health Effects
No health effects information available for this bacterium.


