Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Sedimentitalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Sedimentitalea |
| Species | Sedimentitalea nanhaiensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959264 bp
Thymine Count
958608 bp
Guanine Count
1487139 bp
Cytosine Count
1484483 bp
Genome Length
4890154 bp
Protein-coding Genes
4776 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN05216236_1549 | Not Available | Negative | 4612063 - 4613130 | 38783.5 |
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN05216236_15410 | Not Available | Negative | 4613078 - 4614310 | 45201.3 |
| transcriptional regulator, asnc family | SAMN05216236_15411 | Not Available | Negative | 4614536 - 4615006 | 17720.3 |
| leucine dehydrogenase | SAMN05216236_15412 | Not Available | Positive | 4615213 - 4616277 | 37688.1 |
| lysr family transcriptional regulator, pca operon transcriptional activator | SAMN05216236_15413 | Not Available | Negative | 4616453 - 4617373 | 32677.2 |
| p-hydroxybenzoate 3-monooxygenase | SAMN05216236_15414 | Not Available | Positive | 4617465 - 4618634 | 43516.7 |
| 4-carboxymuconolactone decarboxylase | SAMN05216236_15415 | Not Available | Positive | 4618645 - 4619028 | 13831.4 |
| protocatechuate 3,4-dioxygenase, beta subunit | SAMN05216236_15416 | Not Available | Positive | 4619025 - 4619747 | 27031.9 |
| protocatechuate 3,4-dioxygenase, alpha subunit | SAMN05216236_15417 | Not Available | Positive | 4619750 - 4620349 | 21675.6 |
| uncharacterized conserved protein, duf849 family | SAMN05216236_15418 | Not Available | Positive | 4620357 - 4621193 | 30284.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
