Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | US-Trep |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
855646 bp
Thymine Count
851993 bp
Guanine Count
520327 bp
Cytosine Count
526560 bp
Genome Length
2754526 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | HMPREF9728_00403 | Not Available | Negative | 424488 - 426368 | 70545.2 |
| crispr-associated protein cas9/csn1, subtype ii/nmemi | HMPREF9728_00404 | Not Available | Positive | 426671 - 430858 | 162014.0 |
| crispr-associated endonuclease cas1, subtype ii/nmeni | HMPREF9728_00405 | Not Available | Positive | 430855 - 431727 | 33446.5 |
| crispr-associated endoribonuclease cas2 | HMPREF9728_00406 | Not Available | Positive | 431732 - 432037 | 11793.5 |
| crispr type ii-a/nmemi-associated protein csn2 | HMPREF9728_00407 | Not Available | Positive | 432034 - 432708 | 26139.6 |
| hypothetical protein | HMPREF9728_00408 | Not Available | Positive | 433049 - 433699 | 25817.2 |
| mate efflux family protein | HMPREF9728_00409 | Not Available | Positive | 433781 - 435136 | 49384.7 |
| hypothetical protein | HMPREF9728_00410 | Not Available | Negative | 435245 - 435997 | 28133.5 |
| ribonucleoside-diphosphate reductase subunit beta | HMPREF9728_00411 | Not Available | Negative | 436111 - 437166 | 40988.4 |
| hypothetical protein | HMPREF9728_00412 | Not Available | Negative | 437178 - 438296 | 41725.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


