Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema denticola |
| Strain | US-Trep |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
855646 bp
Thymine Count
851993 bp
Guanine Count
520327 bp
Cytosine Count
526560 bp
Genome Length
2754526 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtp-binding protein ysxc | HMPREF9728_02439 | Not Available | Positive | 2553452 - 2554090 | 23744.1 |
| hypothetical protein | HMPREF9728_02440 | Not Available | Positive | 2554094 - 2554708 | 23397.7 |
| rlua family pseudouridine synthase | HMPREF9728_02441 | Not Available | Positive | 2554748 - 2555482 | 28242.3 |
| hypothetical protein | HMPREF9728_02442 | Not Available | Negative | 2555516 - 2555929 | 15677.1 |
| hypothetical protein | HMPREF9728_02443 | Not Available | Negative | 2555926 - 2556180 | 9587.51 |
| atp-dependent dna helicase recg | HMPREF9728_02444 | Not Available | Negative | 2556314 - 2558350 | 75872.2 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9728_02445 | Not Available | Positive | 2558472 - 2563796 | 207108.0 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9728_02446 | Not Available | Positive | 2563809 - 2569112 | 204361.0 |
| Trna-pro | Not Available | Not Available | Positive | 2569114 - 2569185 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2569240 - 2569314 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


