Treponema denticola US-Trep

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola US-Trep is a Gram-negative, anaerobic bacterium characterized by its spiral shape (spirilla) and single-cell arrangement. It is notable for possessing a single replicon and two membranes, which are typical features of its cell structure. T. denticola is classified as mesophilic, with an optimal growth temperature of 30°C, indicating a preference for moderate temperature environments. This bacterium is free-living, and while it does not exhibit mobility, it does have flagella, which are generally associated with motility in other bacterial species. Its habitat is primarily host-associated, suggesting a close relationship with its host organisms. The ecological role of T. denticola may be significant in the context of oral microbiology, as it is commonly found in the human oral cavity. Its anaerobic nature allows it to thrive in the oxygen-poor environment of dental plaque, where it may play a role in periodontal diseases. The presence of this bacterium and its interactions with other microbial species in the oral ecosystem underscores its potential impact on oral health and disease dynamics. Further research into T. denticola could enhance our understanding of its biological functions and its contributions to oral microbiota composition.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainUS-Trep

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema denticola US-Trep
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema denticola US-Trep acdtB-supercont1.2.C22, whole genome

Gene Summary

Adenine Count

855646 bp

Thymine Count

851993 bp

Guanine Count

520327 bp

Cytosine Count

526560 bp

Genome Length

2754526 bp

Protein-coding Genes

2542 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome biogenesis gtp-binding protein ysxcHMPREF9728_02439Not AvailablePositive2553452 - 255409023744.1
hypothetical proteinHMPREF9728_02440Not AvailablePositive2554094 - 255470823397.7
rlua family pseudouridine synthaseHMPREF9728_02441Not AvailablePositive2554748 - 255548228242.3
hypothetical proteinHMPREF9728_02442Not AvailableNegative2555516 - 255592915677.1
hypothetical proteinHMPREF9728_02443Not AvailableNegative2555926 - 25561809587.51
atp-dependent dna helicase recgHMPREF9728_02444Not AvailableNegative2556314 - 255835075872.2
diguanylate cyclase (ggdef) domain-containing proteinHMPREF9728_02445Not AvailablePositive2558472 - 2563796207108.0
diguanylate cyclase (ggdef) domain-containing proteinHMPREF9728_02446Not AvailablePositive2563809 - 2569112204361.0
Trna-proNot AvailableNot AvailablePositive2569114 - 2569185Not Available
Trna-aspNot AvailableNot AvailablePositive2569240 - 2569314Not Available

Displaying genes 2441 – 2450 of 2602 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.