Treponema denticola OTK

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola OTK is a Gram-negative, anaerobic bacterium characterized by its spirilla shape and presence of flagella. This organism typically exists in singles rather than in clusters or chains. As a mesophilic species, it thrives at an optimal temperature of 30°C, indicating its preference for moderate temperature ranges. With two replicons and two membranes, Treponema denticola OTK exhibits a complex genetic structure that may facilitate its adaptability to different host environments. The organism is categorized as free-living, suggesting a capability to exist independently, although it is also associated with host environments. The biotic relationships of Treponema denticola OTK within its habitats can have implications for the broader ecological context, particularly in the oral microbiome where it is often found. Its anaerobic nature and unique cellular structure may play significant roles in the microbial dynamics of the environment, influencing both its own survival and the interactions with other microbial species. Overall, the characteristics of Treponema denticola OTK highlight its specialized adaptations to anaerobic conditions and its free-living lifestyle, which could have significant implications for its ecological niche and interactions within host-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainOTK

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema denticola OTK
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema denticola OTK cont1.11, whole genome shotgun sequence.

Gene Summary

Adenine Count

887492 bp

Thymine Count

888002 bp

Guanine Count

536452 bp

Cytosine Count

538341 bp

Genome Length

2850287 bp

Protein-coding Genes

2626 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-tyrNot AvailableNot AvailablePositive2825936 - 2826017Not Available
ykgj family cysteine cluster proteinHMPREF9723_RS13285Not AvailablePositive2826089 - 282653517519.9
mbl fold metallo-hydrolaseHMPREF9723_RS13290Not AvailablePositive2826565 - 282752736833.7
hypothetical proteinHMPREF9723_RS13295Not AvailablePositive2827524 - 28277157172.38
endolytic transglycosylase mltgHMPREF9723_RS13300Not AvailablePositive2827735 - 282875738266.7
glycosyltransferase family 4 proteinHMPREF9723_RS13305Not AvailablePositive2828821 - 282993340954.2
phosphoribosyltransferaseHMPREF9723_RS13310Not AvailablePositive2829997 - 283059923409.8
chitobiase/beta-hexosaminidase c-terminal domain-containing proteinHMPREF9723_RS13315Not AvailablePositive2830596 - 283279183038.5
ribonuclease hiiHMPREF9723_RS13320Not AvailablePositive2832791 - 283338722618.3
ybab/ebfc family nucleoid-associated proteinHMPREF9723_RS13325Not AvailablePositive2833484 - 283378910924.3

Displaying genes 5371 – 5380 of 5394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.