Treponema denticola OTK

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola OTK is a Gram-negative, anaerobic bacterium characterized by its spirilla shape and presence of flagella. This organism typically exists in singles rather than in clusters or chains. As a mesophilic species, it thrives at an optimal temperature of 30°C, indicating its preference for moderate temperature ranges. With two replicons and two membranes, Treponema denticola OTK exhibits a complex genetic structure that may facilitate its adaptability to different host environments. The organism is categorized as free-living, suggesting a capability to exist independently, although it is also associated with host environments. The biotic relationships of Treponema denticola OTK within its habitats can have implications for the broader ecological context, particularly in the oral microbiome where it is often found. Its anaerobic nature and unique cellular structure may play significant roles in the microbial dynamics of the environment, influencing both its own survival and the interactions with other microbial species. Overall, the characteristics of Treponema denticola OTK highlight its specialized adaptations to anaerobic conditions and its free-living lifestyle, which could have significant implications for its ecological niche and interactions within host-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainOTK

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema denticola OTK
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema denticola OTK cont1.11, whole genome shotgun sequence.

Gene Summary

Adenine Count

887492 bp

Thymine Count

888002 bp

Guanine Count

536452 bp

Cytosine Count

538341 bp

Genome Length

2850287 bp

Protein-coding Genes

2626 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yicc/yloc family endoribonucleaseHMPREF9723_RS11175Not AvailablePositive2374370 - 237523633251.1
(d)cmp kinaseHMPREF9723_RS11180Not AvailablePositive2375254 - 237581721220.7
hypothetical proteinHMPREF9723_RS11185Not AvailableNegative2375809 - 237648925965.1
hypothetical proteinHMPREF9723_RS11190Not AvailableNegative2376504 - 237747837798.2
threonine--trna ligaseHMPREF9723_RS11195Not AvailablePositive2377690 - 237944766995.6
hypothetical proteinHMPREF9723_RS11200Not AvailableNegative2379476 - 238023428492.7
rhs repeat-associated core domain-containing proteinHMPREF9723_RS11205Not AvailableNegative2380265 - 2383623125974.0
duf4912 domain-containing proteinHMPREF9723_RS11210Not AvailablePositive2383882 - 238458627146.0
glycoside hydrolase family 57 proteinHMPREF9723_RS11215Not AvailablePositive2384573 - 238615060546.0
alanine racemaseHMPREF9723_RS11220Not AvailablePositive2386304 - 238744342084.7

Displaying genes 4951 – 4960 of 5394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.