Treponema denticola OTK

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola OTK is a Gram-negative, anaerobic bacterium characterized by its spirilla shape and presence of flagella. This organism typically exists in singles rather than in clusters or chains. As a mesophilic species, it thrives at an optimal temperature of 30°C, indicating its preference for moderate temperature ranges. With two replicons and two membranes, Treponema denticola OTK exhibits a complex genetic structure that may facilitate its adaptability to different host environments. The organism is categorized as free-living, suggesting a capability to exist independently, although it is also associated with host environments. The biotic relationships of Treponema denticola OTK within its habitats can have implications for the broader ecological context, particularly in the oral microbiome where it is often found. Its anaerobic nature and unique cellular structure may play significant roles in the microbial dynamics of the environment, influencing both its own survival and the interactions with other microbial species. Overall, the characteristics of Treponema denticola OTK highlight its specialized adaptations to anaerobic conditions and its free-living lifestyle, which could have significant implications for its ecological niche and interactions within host-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainOTK

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema denticola OTK
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema denticola OTK cont1.11, whole genome shotgun sequence.

Gene Summary

Adenine Count

887492 bp

Thymine Count

888002 bp

Guanine Count

536452 bp

Cytosine Count

538341 bp

Genome Length

2850287 bp

Protein-coding Genes

2626 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
p-ii family nitrogen regulatorHMPREF9723_RS14400Not AvailableNegative1630043 - 163069023941.5
duf1538 domain-containing proteinHMPREF9723_RS07560Not AvailableNegative1630687 - 163216852812.9
hypothetical proteinHMPREF9723_RS07565Not AvailablePositive1632224 - 163284423042.5
hypothetical proteinHMPREF9723_RS07570Not AvailablePositive1632831 - 163343322896.0
dna helicase recqHMPREF9723_RS07575Not AvailableNegative1633478 - 163535870518.1
type ii crispr rna-guided endonuclease cas9HMPREF9723_RS07580Not AvailablePositive1635661 - 1639848161880.0
type ii crispr-associated endonuclease cas1HMPREF9723_RS07585Not AvailablePositive1639845 - 164071733373.4
crispr-associated endonuclease cas2HMPREF9723_RS07590Not AvailablePositive1640722 - 164102711763.5
type ii-a crispr-associated protein csn2HMPREF9723_RS07595Not AvailablePositive1641024 - 164169826230.6
tetr/acrr family transcriptional regulatorHMPREF9723_RS07600Not AvailablePositive1643197 - 164384725803.2

Displaying genes 4221 – 4230 of 5394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.