Treponema denticola OTK

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola OTK is a Gram-negative, anaerobic bacterium characterized by its spirilla shape and presence of flagella. This organism typically exists in singles rather than in clusters or chains. As a mesophilic species, it thrives at an optimal temperature of 30°C, indicating its preference for moderate temperature ranges. With two replicons and two membranes, Treponema denticola OTK exhibits a complex genetic structure that may facilitate its adaptability to different host environments. The organism is categorized as free-living, suggesting a capability to exist independently, although it is also associated with host environments. The biotic relationships of Treponema denticola OTK within its habitats can have implications for the broader ecological context, particularly in the oral microbiome where it is often found. Its anaerobic nature and unique cellular structure may play significant roles in the microbial dynamics of the environment, influencing both its own survival and the interactions with other microbial species. Overall, the characteristics of Treponema denticola OTK highlight its specialized adaptations to anaerobic conditions and its free-living lifestyle, which could have significant implications for its ecological niche and interactions within host-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainOTK

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema denticola OTK
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema denticola OTK cont1.11, whole genome shotgun sequence.

Gene Summary

Adenine Count

887492 bp

Thymine Count

888002 bp

Guanine Count

536452 bp

Cytosine Count

538341 bp

Genome Length

2850287 bp

Protein-coding Genes

2626 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crp/fnr family transcriptional regulatorHMPREF9723_RS06355Not AvailableNegative1342574 - 134382146965.5
m20 family metallo-hydrolaseHMPREF9723_RS06360Not AvailablePositive1343980 - 134521545323.2
kama family radical sam proteinHMPREF9723_RS06365Not AvailablePositive1345234 - 134625037933.9
rna polymerase sigma factor rpod/sigaHMPREF9723_RS06370Not AvailablePositive1346396 - 134722331715.3
peptidase u32 family proteinHMPREF9723_RS06375Not AvailablePositive1347284 - 134952484064.9
methyl-accepting chemotaxis proteinHMPREF9723_RS06380Not AvailablePositive1349603 - 135174179150.2
small ribosomal subunit rsm22 family proteinHMPREF9723_RS06385Not AvailableNegative1351766 - 135315452966.1
merr family transcriptional regulatorHMPREF9723_RS06390Not AvailableNegative1353138 - 135346412210.7
ribosome biogenesis gtpase derHMPREF9723_RS06395Not AvailableNegative1353467 - 135489753621.4
phosphoenolpyruvate--protein phosphotransferaseHMPREF9723_RS06400Not AvailableNegative1354884 - 135666866255.6

Displaying genes 3971 – 3980 of 5394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.