Treponema denticola OTK

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola OTK is a Gram-negative, anaerobic bacterium characterized by its spirilla shape and presence of flagella. This organism typically exists in singles rather than in clusters or chains. As a mesophilic species, it thrives at an optimal temperature of 30°C, indicating its preference for moderate temperature ranges. With two replicons and two membranes, Treponema denticola OTK exhibits a complex genetic structure that may facilitate its adaptability to different host environments. The organism is categorized as free-living, suggesting a capability to exist independently, although it is also associated with host environments. The biotic relationships of Treponema denticola OTK within its habitats can have implications for the broader ecological context, particularly in the oral microbiome where it is often found. Its anaerobic nature and unique cellular structure may play significant roles in the microbial dynamics of the environment, influencing both its own survival and the interactions with other microbial species. Overall, the characteristics of Treponema denticola OTK highlight its specialized adaptations to anaerobic conditions and its free-living lifestyle, which could have significant implications for its ecological niche and interactions within host-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainOTK

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema denticola OTK
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema denticola OTK cont1.11, whole genome shotgun sequence.

Gene Summary

Adenine Count

887492 bp

Thymine Count

888002 bp

Guanine Count

536452 bp

Cytosine Count

538341 bp

Genome Length

2850287 bp

Protein-coding Genes

2626 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rpn family recombination-promoting nuclease/putative transposaseHMPREF9723_RS03350Not AvailableNegative678055 - 67892134111.4
copper homeostasis protein cutcHMPREF9723_RS03355Not AvailableNegative679039 - 67977926868.8
hypothetical proteinHMPREF9723_RS03360Not AvailablePositive679895 - 68111546179.6
dna topoisomerase iv subunit bHMPREF9723_RS03365Not AvailablePositive681115 - 68293267988.5
abrb/maze/spovt family dna-binding domain-containing proteinHMPREF9723_RS03370Not AvailablePositive683008 - 6832509364.25
type ii toxin-antitoxin system pemk/mazf family toxinHMPREF9723_RS03375Not AvailablePositive683238 - 68356712365.6
thif family adenylyltransferaseHMPREF9723_RS03380Not AvailableNegative683582 - 68430126179.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseHMPREF9723_RS03385Not AvailableNegative684321 - 68537939079.7
duf368 domain-containing proteinHMPREF9723_RS03390Not AvailablePositive685456 - 68620226711.1
uracil permeaseHMPREF9723_RS03395Not AvailablePositive686348 - 68761044237.6

Displaying genes 3361 – 3370 of 5394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.