Treponema denticola H1-T

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola H1-T is a Gram-negative, anaerobic bacterium characterized by its spirilla shape and presence of flagella. This organism is primarily host-associated, reflecting its biotic relationship as free-living, which suggests it can inhabit a variety of environments, particularly those associated with host organisms. The cells of T. denticola H1-T are arranged as singles and are non-motile, which may influence its ecological interactions within its habitat. It has a mesophilic temperature range with an optimal growth temperature of 30°C, indicating a preference for moderate environmental conditions. T. denticola H1-T possesses two membranes and replicons, which are structural features that can play a role in its cellular processes and adaptability. Given its anaerobic lifestyle, T. denticola H1-T thrives in environments devoid of oxygen, which is typical for many microorganisms found in the human oral cavity, where it is commonly detected. This habitat association highlights its potential role in the complex microbial ecosystems of the oral microbiome, where it may contribute to both health and disease states. In summary, the characteristics of Treponema denticola H1-T provide insights into its ecological niche and functional roles within host-associated environments, particularly in anaerobic conditions, underscoring its relevance in microbiological and clinical contexts.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainH1-T

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema denticola H1-T
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema denticola H1-T cont1.26, whole genome shotgun sequence.

Gene Summary

Adenine Count

906504 bp

Thymine Count

906132 bp

Guanine Count

556668 bp

Cytosine Count

551295 bp

Genome Length

2920599 bp

Protein-coding Genes

2675 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
paqr family membrane homeostasis protein trhaHMPREF9725_RS06150Not AvailablePositive1343533 - 134418624035.4
Trna-metNot AvailableNot AvailablePositive1344197 - 1344270Not Available
duf4097 family beta strand repeat-containing proteinHMPREF9725_RS06160Not AvailableNegative1344538 - 134535630026.2
yggs family pyridoxal phosphate-dependent enzymeHMPREF9725_RS06165Not AvailableNegative1345337 - 134607728049.3
right-handed parallel beta-helix repeat-containing proteinHMPREF9725_RS06170Not AvailablePositive1346457 - 134896488827.3
leucine-rich repeat domain-containing proteinHMPREF9725_RS06175Not AvailablePositive1349020 - 135013240125.8
hypothetical proteinHMPREF9725_RS13900Not AvailableNegative1350502 - 13506847150.69
rpn family recombination-promoting nuclease/putative transposaseHMPREF9725_RS06180Not AvailablePositive1350912 - 135179333654.5
hypothetical proteinHMPREF9725_RS06185Not AvailableNegative1352009 - 135239814719.8
sigma 54-interacting transcriptional regulatorHMPREF9725_RS06190Not AvailablePositive1352905 - 135444656744.0

Displaying genes 4091 – 4100 of 5513 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.