Treponema denticola H1-T

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola H1-T is a Gram-negative, anaerobic bacterium characterized by its spirilla shape and presence of flagella. This organism is primarily host-associated, reflecting its biotic relationship as free-living, which suggests it can inhabit a variety of environments, particularly those associated with host organisms. The cells of T. denticola H1-T are arranged as singles and are non-motile, which may influence its ecological interactions within its habitat. It has a mesophilic temperature range with an optimal growth temperature of 30°C, indicating a preference for moderate environmental conditions. T. denticola H1-T possesses two membranes and replicons, which are structural features that can play a role in its cellular processes and adaptability. Given its anaerobic lifestyle, T. denticola H1-T thrives in environments devoid of oxygen, which is typical for many microorganisms found in the human oral cavity, where it is commonly detected. This habitat association highlights its potential role in the complex microbial ecosystems of the oral microbiome, where it may contribute to both health and disease states. In summary, the characteristics of Treponema denticola H1-T provide insights into its ecological niche and functional roles within host-associated environments, particularly in anaerobic conditions, underscoring its relevance in microbiological and clinical contexts.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainH1-T

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema denticola H1-T
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema denticola H1-T cont1.26, whole genome shotgun sequence.

Gene Summary

Adenine Count

906504 bp

Thymine Count

906132 bp

Guanine Count

556668 bp

Cytosine Count

551295 bp

Genome Length

2920599 bp

Protein-coding Genes

2675 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenosylcobinamide-phosphate synthase cbibHMPREF9725_RS05810Not AvailablePositive1278884 - 127995740220.5
atp-dependent clp protease proteolytic subunitHMPREF9725_RS05815Not AvailableNegative1279916 - 128051822427.3
4-alpha-glucanotransferaseHMPREF9725_RS05820Not AvailableNegative1280593 - 128221562848.0
hypothetical proteinHMPREF9725_RS15395Not AvailableNegative1282212 - 128284424981.8
d-alanine--d-alanine ligase family proteinHMPREF9725_RS05830Not AvailableNegative1282850 - 128395641215.8
histidine phosphatase family proteinHMPREF9725_RS05835Not AvailableNegative1284038 - 128462822351.7
adenosylcobinamide-gdp ribazoletransferaseHMPREF9725_RS05840Not AvailableNegative1284646 - 128542828990.5
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseHMPREF9725_RS05845Not AvailableNegative1285425 - 128597620399.0
sensor histidine kinaseHMPREF9725_RS05850Not AvailableNegative1286038 - 128718643996.0
abc transporter permeaseHMPREF9725_RS05855Not AvailableNegative1287273 - 128843643647.5

Displaying genes 4021 – 4030 of 5513 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.