Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL02T12C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_00374 | Not Available | Positive | 388934 - 390436 | 55244.0 |
| cytochrome d ubiquinol oxidase, subunit ii | HMPREF1064_00375 | Not Available | Positive | 390500 - 391645 | 42797.6 |
| 6-phosphogluconolactonase | HMPREF1064_00376 | Not Available | Negative | 391941 - 392645 | 26378.4 |
| glucose-6-phosphate dehydrogenase | HMPREF1064_00377 | Not Available | Negative | 392706 - 394214 | 58036.4 |
| 6-phosphogluconate dehydrogenase, decarboxylating | HMPREF1064_00378 | Not Available | Negative | 394263 - 395699 | 52947.7 |
| hypothetical protein | HMPREF1064_00379 | Not Available | Positive | 395784 - 396962 | 41964.4 |
| hypothetical protein | HMPREF1064_00380 | Not Available | Positive | 397084 - 397398 | 12046.8 |
| hypothetical protein | HMPREF1064_00381 | Not Available | Positive | 397395 - 397799 | 15353.2 |
| hypothetical protein | HMPREF1064_00382 | Not Available | Negative | 397927 - 399096 | 45050.2 |
| l-asparaginase, type ii | HMPREF1064_00383 | Not Available | Negative | 399185 - 400243 | 37861.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

