Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL02T12C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_00337 | Not Available | Negative | 345738 - 345926 | 7289.19 |
| competence protein comea helix-hairpin-helix repeat region | HMPREF1064_00338 | Not Available | Positive | 346262 - 348391 | 79538.3 |
| hypothetical protein | HMPREF1064_00339 | Not Available | Positive | 348414 - 349211 | 30097.3 |
| aspt/yide/ybjl antiporter duplication domain-containing protein | HMPREF1064_00340 | Not Available | Positive | 349288 - 350949 | 59531.1 |
| fructose-1,6-bisphosphatase class 3 | HMPREF1064_00341 | Not Available | Positive | 350959 - 352959 | 76529.4 |
| aspartate 1-decarboxylase | HMPREF1064_00342 | Not Available | Negative | 353088 - 353438 | 12822.7 |
| pantothenate synthetase | HMPREF1064_00343 | Not Available | Negative | 353460 - 354308 | 31339.6 |
| hypothetical protein | HMPREF1064_00344 | Not Available | Positive | 354660 - 355484 | 31946.1 |
| hypothetical protein | HMPREF1064_00345 | Not Available | Positive | 355504 - 356934 | 53577.3 |
| hypothetical protein | HMPREF1064_00346 | Not Available | Negative | 357184 - 357561 | 13945.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

