Phocaeicola dorei CL02T12C06

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola dorei CL02T12C06 is a Gram-negative, non-motile, rod-shaped bacterium classified as a chemoheterotroph. This organism is an anaerobe, meaning it thrives in environments devoid of oxygen. Its optimal growth temperature is 37°C, and it is categorized as mesophilic, indicating it can grow in moderate temperature ranges typical of many biological systems. The bacterium has a single replicon and is nonsporulating, which suggests it does not form spores as a means of survival under adverse conditions. P. dorei is found in multiple habitats, although specific environments are not detailed in the available data. The presence of flagella indicates that, while this strain is non-motile, it may possess the potential for movement in other contexts or under different conditions. The significance of these traits lies in the bacterium's ecological role; as a chemoheterotroph, P. dorei likely contributes to the breakdown of organic matter in anaerobic environments, facilitating nutrient cycling within its habitat. Understanding the characteristics of P. dorei can provide insights into its ecological functions and its interactions with other microorganisms in diverse ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola dorei
StrainCL02T12C06

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola dorei CL02T12C06
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola dorei CL02T12C06 cont1.110, whole genome shotgun

Gene Summary

Adenine Count

1756647 bp

Thymine Count

1710049 bp

Guanine Count

1247135 bp

Cytosine Count

1283480 bp

Genome Length

5997311 bp

Protein-coding Genes

5172 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF1064_03834Not AvailablePositive4300275 - 430082320506.6
heavy metal translocating p-type atpaseHMPREF1064_03835Not AvailableNegative4300911 - 430313080346.5
hypothetical proteinHMPREF1064_03836Not AvailablePositive4303303 - 430415132109.1
ribosomal rna small subunit methyltransferase gHMPREF1064_03837Not AvailablePositive4304172 - 430479823734.0
hypothetical proteinHMPREF1064_03838Not AvailablePositive4304819 - 430545723949.5
glycine dehydrogenaseHMPREF1064_03839Not AvailablePositive4305493 - 4308342105210.0
hypothetical proteinHMPREF1064_03840Not AvailableNegative4308626 - 4311346103210.0
hypothetical proteinHMPREF1064_03841Not AvailableNegative4311373 - 43116099167.97
hypothetical proteinHMPREF1064_03842Not AvailablePositive4311733 - 43119608230.71
formate-tetrahydrofolate ligaseHMPREF1064_03843Not AvailableNegative4311991 - 431365860530.0

Displaying genes 3931 – 3940 of 5319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.