Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL02T12C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 3487457 - 3487530 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3494157 - 3494230 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 3494243 - 3494319 | Not Available |
| glycerate kinase | HMPREF1064_03032 | Not Available | Positive | 3496837 - 3497409 | 20379.8 |
| hypothetical protein | HMPREF1064_03033 | Not Available | Negative | 3497396 - 3500236 | 105161.0 |
| hypothetical protein | HMPREF1064_03034 | Not Available | Negative | 3500309 - 3500914 | 23024.5 |
| signal peptide peptidase sppa, 67k type | HMPREF1064_03035 | Not Available | Positive | 3501050 - 3502831 | 65769.7 |
| tetraacyldisaccharide 4'-kinase | HMPREF1064_03036 | Not Available | Positive | 3502839 - 3503939 | 42257.8 |
| inosine guanosine and xanthosine phosphorylase | HMPREF1064_03037 | Not Available | Positive | 3503902 - 3504711 | 30023.4 |
| thiamine-monophosphate kinase | HMPREF1064_03038 | Not Available | Positive | 3504716 - 3505756 | 38284.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

