Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL02T12C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | HMPREF1064_02673 | Not Available | Negative | 3177835 - 3179154 | 49296.1 |
| hypothetical protein | HMPREF1064_02674 | Not Available | Negative | 3179262 - 3180017 | 28345.1 |
| histidine biosynthesis hisie | HMPREF1064_02675 | Not Available | Negative | 3180022 - 3180633 | 23196.7 |
| imidazole glycerol phosphate synthase subunit hisf | HMPREF1064_02676 | Not Available | Negative | 3180799 - 3181554 | 27227.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | HMPREF1064_02677 | Not Available | Negative | 3181564 - 3182283 | 26680.4 |
| imidazole glycerol phosphate synthase subunit hish | HMPREF1064_02678 | Not Available | Negative | 3182325 - 3182915 | 22283.8 |
| formyltetrahydrofolate deformylase | HMPREF1064_02679 | Not Available | Negative | 3182915 - 3183772 | 33302.5 |
| protease prth | HMPREF1064_02680 | Not Available | Positive | 3183953 - 3184165 | 7941.81 |
| Trna-asp | Not Available | Not Available | Positive | 3184037 - 3184113 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 3184143 - 3184219 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

