Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL02T12C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02523 | Not Available | Positive | 3013209 - 3015092 | 71340.0 |
| carbamoyl-phosphate synthase, small subunit | HMPREF1064_02524 | Not Available | Positive | 3015118 - 3016194 | 39960.5 |
| carbamoyl-phosphate synthase, large subunit | HMPREF1064_02525 | Not Available | Positive | 3016218 - 3019445 | 119750.0 |
| pas domain s-box protein | HMPREF1064_02526 | Not Available | Positive | 3019615 - 3021960 | 89680.6 |
| hypothetical protein | HMPREF1064_02527 | Not Available | Negative | 3022204 - 3022644 | 16811.8 |
| hypothetical protein | HMPREF1064_02528 | Not Available | Negative | 3022913 - 3023371 | 17680.3 |
| hypothetical protein | HMPREF1064_02529 | Not Available | Negative | 3023606 - 3024664 | 39424.4 |
| hypothetical protein | HMPREF1064_02530 | Not Available | Positive | 3025166 - 3026254 | 41431.1 |
| hypothetical protein | HMPREF1064_02531 | Not Available | Negative | 3026384 - 3028081 | 64778.8 |
| hypothetical protein | HMPREF1064_02532 | Not Available | Negative | 3028098 - 3028883 | 29303.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

