Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL02T12C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02494 | Not Available | Positive | 2983520 - 2984455 | 34760.4 |
| hypothetical protein | HMPREF1064_02495 | Not Available | Positive | 2984467 - 2984865 | 15189.1 |
| hypothetical protein | HMPREF1064_02496 | Not Available | Positive | 2985189 - 2985545 | 13346.8 |
| hypothetical protein | HMPREF1064_02497 | Not Available | Positive | 2985771 - 2986106 | 12643.0 |
| cdp-glucose 4,6-dehydratase | HMPREF1064_02498 | Not Available | Positive | 2986109 - 2987167 | 40060.6 |
| hypothetical protein | HMPREF1064_02499 | Not Available | Positive | 2987155 - 2988063 | 33812.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HMPREF1064_02500 | Not Available | Positive | 2988074 - 2988643 | 21795.7 |
| hypothetical protein | HMPREF1064_02501 | Not Available | Positive | 2988645 - 2989931 | 49337.7 |
| hypothetical protein | HMPREF1064_02502 | Not Available | Positive | 2989947 - 2990873 | 35855.0 |
| hypothetical protein | HMPREF1064_02503 | Not Available | Positive | 2990878 - 2992107 | 46718.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

