Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL02T12C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | HMPREF1064_02464 | Not Available | Positive | 2956205 - 2956801 | 22653.5 |
| 50s ribosomal protein l35 | HMPREF1064_02465 | Not Available | Positive | 2956873 - 2957070 | 7367.31 |
| 50s ribosomal protein l20 | HMPREF1064_02466 | Not Available | Positive | 2957182 - 2957532 | 13209.4 |
| hypothetical protein | HMPREF1064_02467 | Not Available | Positive | 2957999 - 2958766 | 28937.9 |
| hypothetical protein | HMPREF1064_02468 | Not Available | Negative | 2958991 - 2960025 | 39486.8 |
| alpha-n-arabinofuranosidase 2 | HMPREF1064_02469 | Not Available | Positive | 2960224 - 2961747 | 57315.4 |
| hypothetical protein | HMPREF1064_02470 | Not Available | Negative | 2961835 - 2962692 | 32366.9 |
| hypothetical protein | HMPREF1064_02471 | Not Available | Positive | 2962817 - 2964166 | 51847.5 |
| hypothetical protein | HMPREF1064_02472 | Not Available | Positive | 2964185 - 2966224 | 79683.4 |
| hypothetical protein | HMPREF1064_02473 | Not Available | Positive | 2966648 - 2967478 | 31674.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

